Package: syncons
Title: Efficient and Low-Cost Construction of Synthetic Communities
Version: 0.1.1
Authors@R: person("Chun-Hui","Gao", email="gaospecial@gmail.com",
  role=c("aut","cre"), comment=c(ORCID = "0000-0002-1445-7939"))
Description: Provides functions and a Shiny application to design plate
        layouts for constructing synthetic communities (SynComs) from a
        pool of strains using 24-, 96- and 384-well microplates. The
        method generates all possible strain combinations in a
        scalable, low-cost workflow suitable for high-throughput
        experiments. Reference: Tian et al. (2024)
        <doi:10.21769/BioProtoc.2405576>.
URL: https://github.com/gaospecial/syncons,
        https://doi.org/10.21769/BioProtoc.2405576,
        https://bio-spring.shinyapps.io/SynComsConstructor/
BugReports: https://github.com/gaospecial/syncons/issues
License: GPL (>= 3)
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.3
Imports: dplyr, DT, glue, purrr, shiny, stringr, tibble, tidyr, utils
Config/pak/sysreqs: cmake make libicu-dev libuv1-dev zlib1g-dev
Repository: https://gaospecial.r-universe.dev
Date/Publication: 2026-07-28 00:21:37 UTC
RemoteUrl: https://github.com/gaospecial/syncons
RemoteRef: HEAD
RemoteSha: 3859475da3223c379308ee362d5989b82700feca
NeedsCompilation: no
Packaged: 2026-10-05 10:49:36 UTC; root
Author: Chun-Hui Gao [aut, cre] (ORCID:
    <https://orcid.org/0000-0002-1445-7939>)
Maintainer: Chun-Hui Gao <gaospecial@gmail.com>
Depends: R (>= 4.1.0)